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|    talk.origins    |    Evolution versus creationism (sometimes    |    142,579 messages    |
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|    Message 141,299 of 142,579    |
|    RonO to MarkE    |
|    Re: Student of Stanley Miller comments o    |
|    22 Aug 25 08:19:37    |
      From: rokimoto557@gmail.com              On 8/21/2025 6:26 PM, MarkE wrote:       > A perspective on OoL from Dr. Edward T. Peltzer. Quotes following are       > interview excerpts.       > _______       >       > I did have many discussions with Miller and Bada on many subjects, but       > the issues of pre-biotic chemistry and the origin of life were the most       > common. Both were excellent chemists. You could ask them about almost       > anything and they would have an answer or know where one could look to       > find out. In some cases, I suspected they already knew, but wanted to       > give me the experience of scouring the library to find out. One could       > say that they taught me everything I new about prebiotic chemistry at       > the time.       >       > During his doctoral studies at the Scripps Institution of Oceanography       > (SIO), he was mentored by two luminaries in prebiotic chemistry: Stanley       > Miller, renowned for the Miller-Urey experiment simulating early Earth       > conditions, and Jeffrey Bada, an expert in the field of amino acid       > racemization and a prominent figure in the study of organic compounds in       > meteorites.       >       > As for the various individual [OoL] theories, here are a few of the       > fatal errors. Hydrothermal vents do not make organic compounds, they       > destroy them.       >       > Surface based synthesis might yield a few useful compounds, but many       > compounds with a diverse range of functionality are needed for the first       > organism. RNA is too unstable outside a living cell to offer much hope       > of it doing anything in the pre-biotic soup if somehow it was formed       > (which is exceptionally unlikely).       >       > My least favorite theory among all the options is the lipid world.       > Assuming that one could get a collection of similar chain length fatty       > acids bonded to glycerol to make triglycerides (which itself is highly       > unlikely in the pre-biotic soup of randomly generated compounds), then       > one could form an artificial vesicle (alternatively called a coacervate       > or liposome) with a lipid bilayer film. What you then have is not much       > more than a “soap bubble.” There is no interior metabolism, no ion-       > transport pathways in the “membrane”; it is nothing more than a film-       > coated droplet. How it would acquire an internal metabolism, etc., is       > anyone’s guess. But guesses, as entertaining as they might be, are not a       > scientific explanation of how life arose abiotically.       >       > Random undirected chemistry does not yield biopolymers. Organisms need       > proteins, DNA &/or RNA, polysaccharides, etc. These polymers are uniform       > in that they are composed of a monomeric class of compounds bound       > together in very specific ways: proteins are chains of amino acids       > linked by peptide bonds; DNA & RNA are chains of nucleotides linked by       > phosphate bridges; polysaccharides (e.g., starch & cellulose) are chains       > of glucose molecules linked by α-(1,4) glycosidic bonds in starch       > (amylose) and β-(1,4) glycosidic bonds in cellulose. Random, undirected       > chemical reactions do not yield these pure polymers. Instead, they yield       > polymers formed by random condensations of whatever compounds are at       > hand, producing high molecular weight compounds without a well-defined       > structure. Examples of this are fulvic and humic acids, melanoids, etc.       > Their structures are complex, involve monomers from a variety of       > compound classes and without a common bonding pattern. As such, they       > exhibit little to no biological activity and store no information.       >       > The biggest challenge of all will be to convince the folks who dream up       > the various theories for the origin of life to include the impact of       > competing reactions on their pathways as opposed to writing “just so       > stories.”       >       > The origin of homochirality (D-sugars, L-amino acids, etc.) has proved       > to be a difficult problem to solve. The goal needs to be chiral purity       > otherwise just a single wrong isomer can completely foul the       > functionality of the biopolymer (protein, DNA/RNA, etc.). Homochirality       > is always up against racemization, the process by which chiral molecules       > get mixed with their mirror images (enantiomers). Any such lack of       > purity among chiral molecules is deadly to life. All three of the       > proposed processes to achieve homochirality fail for such reasons.       > First, they are slow and only achieve a partial enrichment of the       > desired form. Second, racemization reactions work faster to undo this       > enrichment. What little progress is made is quickly lost. Third, the       > racemization rate increases with temperature. So, the condition needed       > to speed-up other synthesis processes works against homochirality. The       > source of homochirality remains an unsolved mystery.       >       > Another problem for abiotic synthesis is that some amino acids have two       > amino groups, and some have two carboxylic acid groups. This leads to       > the possibility that the carboxlic acid group can bind with the wrong       > amino group (or vice-versa) and thus branches can form in undirected       > syntheses. None of the proteins in living systems have “branches” as              [continued in next message]              --- SoupGate-Win32 v1.05        * Origin: you cannot sedate... all the things you hate (1:229/2)    |
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