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|    talk.origins    |    Evolution versus creationism (sometimes    |    142,579 messages    |
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|    Message 141,312 of 142,579    |
|    Chris Thompson to sticks    |
|    Re: Student of Stanley Miller comments o    |
|    25 Aug 25 22:23:20    |
      From: the_thompsons@earthlink.net              sticks wrote:       > On 8/23/2025 8:06 AM, MarkE wrote:       >> On 22/08/2025 11:19 pm, RonO wrote:       >>> On 8/21/2025 6:26 PM, MarkE wrote:       >>>> A perspective on OoL from Dr. Edward T. Peltzer. Quotes following       >>>> are interview excerpts.       >>>> _______       >>>>       >>>> I did have many discussions with Miller and Bada on many subjects,       >>>> but the issues of pre-biotic chemistry and the origin of life were       >>>> the most common. Both were excellent chemists. You could ask them       >>>> about almost anything and they would have an answer or know where       >>>> one could look to find out. In some cases, I suspected they already       >>>> knew, but wanted to give me the experience of scouring the library       >>>> to find out. One could say that they taught me everything I new       >>>> about prebiotic chemistry at the time.       >>>>       >>>> During his doctoral studies at the Scripps Institution of       >>>> Oceanography (SIO), he was mentored by two luminaries in prebiotic       >>>> chemistry: Stanley Miller, renowned for the Miller-Urey experiment       >>>> simulating early Earth conditions, and Jeffrey Bada, an expert in       >>>> the field of amino acid racemization and a prominent figure in the       >>>> study of organic compounds in meteorites.       >>>>       >>>> As for the various individual [OoL] theories, here are a few of the       >>>> fatal errors. Hydrothermal vents do not make organic compounds, they       >>>> destroy them.       >>>>       >>>> Surface based synthesis might yield a few useful compounds, but many       >>>> compounds with a diverse range of functionality are needed for the       >>>> first organism. RNA is too unstable outside a living cell to offer       >>>> much hope of it doing anything in the pre-biotic soup if somehow it       >>>> was formed (which is exceptionally unlikely).       >>>>       >>>> My least favorite theory among all the options is the lipid world.       >>>> Assuming that one could get a collection of similar chain length       >>>> fatty acids bonded to glycerol to make triglycerides (which itself       >>>> is highly unlikely in the pre-biotic soup of randomly generated       >>>> compounds), then one could form an artificial vesicle (alternatively       >>>> called a coacervate or liposome) with a lipid bilayer film. What you       >>>> then have is not much more than a “soap bubble.” There is no       >>>> interior metabolism, no ion- transport pathways in the “membrane”;       >>>> it is nothing more than a film- coated droplet. How it would acquire       >>>> an internal metabolism, etc., is anyone’s guess. But guesses, as       >>>> entertaining as they might be, are not a scientific explanation of       >>>> how life arose abiotically.       >>>>       >>>> Random undirected chemistry does not yield biopolymers. Organisms       >>>> need proteins, DNA &/or RNA, polysaccharides, etc. These polymers       >>>> are uniform in that they are composed of a monomeric class of       >>>> compounds bound together in very specific ways: proteins are chains       >>>> of amino acids linked by peptide bonds; DNA & RNA are chains of       >>>> nucleotides linked by phosphate bridges; polysaccharides (e.g.,       >>>> starch & cellulose) are chains of glucose molecules linked by       >>>> α-(1,4) glycosidic bonds in starch (amylose) and β-(1,4) glycosidic       >>>> bonds in cellulose. Random, undirected chemical reactions do not       >>>> yield these pure polymers. Instead, they yield polymers formed by       >>>> random condensations of whatever compounds are at hand, producing       >>>> high molecular weight compounds without a well-defined structure.       >>>> Examples of this are fulvic and humic acids, melanoids, etc. Their       >>>> structures are complex, involve monomers from a variety of compound       >>>> classes and without a common bonding pattern. As such, they exhibit       >>>> little to no biological activity and store no information.       >>>>       >>>> The biggest challenge of all will be to convince the folks who dream       >>>> up the various theories for the origin of life to include the impact       >>>> of competing reactions on their pathways as opposed to writing “just       >>>> so stories.”       >>>>       >>>> The origin of homochirality (D-sugars, L-amino acids, etc.) has       >>>> proved to be a difficult problem to solve. The goal needs to be       >>>> chiral purity otherwise just a single wrong isomer can completely       >>>> foul the functionality of the biopolymer (protein, DNA/RNA, etc.).       >>>> Homochirality is always up against racemization, the process by       >>>> which chiral molecules get mixed with their mirror images       >>>> (enantiomers). Any such lack of purity among chiral molecules is       >>>> deadly to life. All three of the proposed processes to achieve       >>>> homochirality fail for such reasons. First, they are slow and only       >>>> achieve a partial enrichment of the desired form. Second,       >>>> racemization reactions work faster to undo this enrichment. What       >>>> little progress is made is quickly lost. Third, the racemization       >>>> rate increases with temperature. So, the condition needed to       >>>> speed-up other synthesis processes works against homochirality. The       >>>> source of homochirality remains an unsolved mystery.       >>>>              [continued in next message]              --- SoupGate-Win32 v1.05        * Origin: you cannot sedate... all the things you hate (1:229/2)    |
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