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|    talk.origins    |    Evolution versus creationism (sometimes    |    142,579 messages    |
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|    Message 141,347 of 142,579    |
|    Mark Isaak to MarkE    |
|    Re: Student of Stanley Miller comments o    |
|    28 Aug 25 08:53:09    |
      From: specimenNOSPAM@curioustaxon.omy.net              On 8/23/25 6:06 AM, MarkE wrote:       > On 22/08/2025 11:19 pm, RonO wrote:       >> On 8/21/2025 6:26 PM, MarkE wrote:       >>> A perspective on OoL from Dr. Edward T. Peltzer. Quotes following are       >>> interview excerpts.       >>> _______       >>>       >>> I did have many discussions with Miller and Bada on many subjects,       >>> but the issues of pre-biotic chemistry and the origin of life were       >>> the most common. Both were excellent chemists. You could ask them       >>> about almost anything and they would have an answer or know where one       >>> could look to find out. In some cases, I suspected they already knew,       >>> but wanted to give me the experience of scouring the library to find       >>> out. One could say that they taught me everything I new about       >>> prebiotic chemistry at the time.       >>>       >>> During his doctoral studies at the Scripps Institution of       >>> Oceanography (SIO), he was mentored by two luminaries in prebiotic       >>> chemistry: Stanley Miller, renowned for the Miller-Urey experiment       >>> simulating early Earth conditions, and Jeffrey Bada, an expert in the       >>> field of amino acid racemization and a prominent figure in the study       >>> of organic compounds in meteorites.       >>>       >>> As for the various individual [OoL] theories, here are a few of the       >>> fatal errors. Hydrothermal vents do not make organic compounds, they       >>> destroy them.       >>>       >>> Surface based synthesis might yield a few useful compounds, but many       >>> compounds with a diverse range of functionality are needed for the       >>> first organism. RNA is too unstable outside a living cell to offer       >>> much hope of it doing anything in the pre-biotic soup if somehow it       >>> was formed (which is exceptionally unlikely).       >>>       >>> My least favorite theory among all the options is the lipid world.       >>> Assuming that one could get a collection of similar chain length       >>> fatty acids bonded to glycerol to make triglycerides (which itself is       >>> highly unlikely in the pre-biotic soup of randomly generated       >>> compounds), then one could form an artificial vesicle (alternatively       >>> called a coacervate or liposome) with a lipid bilayer film. What you       >>> then have is not much more than a “soap bubble.” There is no interior       >>> metabolism, no ion- transport pathways in the “membrane”; it is       >>> nothing more than a film- coated droplet. How it would acquire an       >>> internal metabolism, etc., is anyone’s guess. But guesses, as       >>> entertaining as they might be, are not a scientific explanation of       >>> how life arose abiotically.       >>>       >>> Random undirected chemistry does not yield biopolymers. Organisms       >>> need proteins, DNA &/or RNA, polysaccharides, etc. These polymers are       >>> uniform in that they are composed of a monomeric class of compounds       >>> bound together in very specific ways: proteins are chains of amino       >>> acids linked by peptide bonds; DNA & RNA are chains of nucleotides       >>> linked by phosphate bridges; polysaccharides (e.g., starch &       >>> cellulose) are chains of glucose molecules linked by α-(1,4)       >>> glycosidic bonds in starch (amylose) and β-(1,4) glycosidic bonds in       >>> cellulose. Random, undirected chemical reactions do not yield these       >>> pure polymers. Instead, they yield polymers formed by random       >>> condensations of whatever compounds are at hand, producing high       >>> molecular weight compounds without a well-defined structure. Examples       >>> of this are fulvic and humic acids, melanoids, etc. Their structures       >>> are complex, involve monomers from a variety of compound classes and       >>> without a common bonding pattern. As such, they exhibit little to no       >>> biological activity and store no information.       >>>       >>> The biggest challenge of all will be to convince the folks who dream       >>> up the various theories for the origin of life to include the impact       >>> of competing reactions on their pathways as opposed to writing “just       >>> so stories.”       >>>       >>> The origin of homochirality (D-sugars, L-amino acids, etc.) has       >>> proved to be a difficult problem to solve. The goal needs to be       >>> chiral purity otherwise just a single wrong isomer can completely       >>> foul the functionality of the biopolymer (protein, DNA/RNA, etc.).       >>> Homochirality is always up against racemization, the process by which       >>> chiral molecules get mixed with their mirror images (enantiomers).       >>> Any such lack of purity among chiral molecules is deadly to life. All       >>> three of the proposed processes to achieve homochirality fail for       >>> such reasons. First, they are slow and only achieve a partial       >>> enrichment of the desired form. Second, racemization reactions work       >>> faster to undo this enrichment. What little progress is made is       >>> quickly lost. Third, the racemization rate increases with       >>> temperature. So, the condition needed to speed-up other synthesis       >>> processes works against homochirality. The source of homochirality       >>> remains an unsolved mystery.       >>>       >>> Another problem for abiotic synthesis is that some amino acids have       >>> two amino groups, and some have two carboxylic acid groups. This              [continued in next message]              --- SoupGate-Win32 v1.05        * Origin: you cannot sedate... all the things you hate (1:229/2)    |
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