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|    talk.origins    |    Evolution versus creationism (sometimes    |    142,579 messages    |
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|    Message 142,359 of 142,579    |
|    MarkE to All    |
|    Welcome to Cell City    |
|    02 Feb 26 17:31:29    |
      From: me22over7@gmail.com              What would it be like to walk around inside a cell? (In this example,       and human ovum.) This exercise may help you comprehend/intuit/appreciate       its workings better.                     *The Scale*              If a nucleotide were the size of a tennis ball, a canonical amino acid       would match a golf ball, averaging 37 and 17 atoms respectively.              A mature human oocyte (ovum) is 7km diameter sphere, with a nucleus of       up to 2km, cell membrane roughly 0.5–0.7 metres thick.                     *The City*              The interior is extremely crowded, but not solid—more like a dense,       moving fog of machinery.              There is no empty space at human scale; movement happens through       constantly shifting gaps.              Objects range from grapefruit-sized to skyscraper-sized, with the       overwhelming majority being small-to-medium machines.                     *The Inhabitants*              A. Individual folded proteins (the dominant population), grapefruit →       soccer ball size; 100–300 amino acid; ~10¹¹–10¹² of them. They are       everywhere: cytoplasm, cortex, perinuclear region, appearing like a       dense swarm of autonomous robots, continuously bumping, binding, releasing.              B. Protein complexes (functional teams), e.g., transcription factors,       spliceosomes, signalling hubs; millions to tens of millions. Form       temporary clusters, especially near the nucleus, cytoskeletal tracks,       membrane regions. They are delivery trucks or small rooms that briefly       assemble, disassemble, and reassemble elsewhere.              C. Ribosomes (protein factories); hundreds of thousands to millions.       Dense in cytoplasm, sparse in nucleus; often found in clusters       (polysomes). Factories the size of small buildings, many operating in       parallel, with raw materials constantly arriving and finished products       immediately released into the crowd.              D. Cytoskeletal assemblies (infrastructure - actin filaments;       microtubules); hundreds of metres to kilometres. Forming dynamic       highways and scaffolding; continuously assembled and dismantled.       Suspension bridges and rail lines that reconfigure in real time while       traffic continues. With cargo hauled by motor proteins (themselves ~1 m       machines walking hand-over-hand).              E. Organelles. E.g. Mitochondrion (power & control district); ~1–2 km       long, ~300–500 m wide; tens to hundreds; outer wall: 0.6m thick, inner       wall: another 0.6 m thick, folded into cristae (folded walls forming       canyons and terraces tens of metres high). Enzymes: thousands of       soccer-ball-scale machines embedded in the walls; proton gradients       become pressure differentials; ATP synthase machines are rotary       turbines. Energy is not “stored” but continuously generated and spent. A       hydroelectric plant built inside a mountain, with internal tunnels       forcing flow in one direction only.              Or, the endoplasmic reticulum (manufacturing & logistics zone); several       kilometres of interconnected sheets and tubes, ~20–50m sheets. A       continuous membrane studded with ribosomes (~25m factories). Interior       (lumen); oxidising environment, chaperones everywhere, quality-control       checkpoints. Proteins are synthesised, folded, checked, rejected or       forwarded. A vast industrial park with assembly lines running directly       into enclosed inspection halls.              F. Nuclear interior (1.3–2 km inner sphere; chromatin fibres of 10–30m       thickness, thousands of kilometres long, tightly folded. Transcription       factories in ~50–100 m clusters, dozens to hundreds active at any time.       A dense industrial core, with massive cable bundles routed through       specialised production districts.                     *The Wall*              ~0.6m thick lipid bilayer (fluid, deformable), with embedded proteins of       many sizes 1–10m. Receptors, channels, pumps, adhesion molecules;       thousands per 100m² of membrane. A living wall studded with doors,       valves, sensors, antennae, and rotating machines, all subtly drifting       laterally. Nothing is fixed in place.              Just beneath the membrane: the cortical zone, a protein meshwork       ~50–100m inward from the membrane. Comprises actin filaments (1–2 m       thick, hundreds of metres long); cross-linkers, regulatory proteins       Provides mechanical stiffness, shape control, polarity establishment,       signal amplification. A dense geodesic lattice pressed up against the       city wall, constantly tightening, loosening, and rearranging.                     *The Experience*              Proteins occupy ~30–40% of volume. Water is the remaining “air”. Nothing       is dilute. Diffusion is like walking through a packed stadium, not       drifting in space. Weak interactions matter; spatial organisation       matters; timing and localisation are as important as sequence.              A living, self-modifying megacity — kilometres wide — built entirely of       moving molecular machines, with no central controller. Upon       fertilisation, going on to divide and differentiate countless times to       assemble a human.                     *The Control*              For example, a city "block" is not executing a single “program.”       Instead, thousands of overlapping processes; no master clock; no central       dispatcher. Control arises from: concentration gradients, proximity,       binding affinities, mechanical constraints. Information is embodied, not       broadcast.                     *The Conclusion*              For me, to marvel, and more. And you?                     _____              Source: ChatGPT                     Also: The Inner Life of the Cell Animation       https://www.youtube.com/watch?v=wJyUtbn0O5Y              --- SoupGate-Win32 v1.05        * Origin: you cannot sedate... all the things you hate (1:229/2)    |
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